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    Genetic assessment reveals no population substructure and divergent regional and sex-specific histories in the Chachapoyas from northeast Peru 

    Guevara, Evelyn K.; Palo, Jukka U.; Oversti, Sanni; King, Jonathan L.; Seidel, Maria; Stoljarova, Monika; Wendt, Frank R.; Bus, Magdalena M.; Guengerich, Anna; Church, Warren B.; Guillen, Sonia; Roewer, Lutz; Budowle, Bruce; Sajantila, Antti (PLOS, 2020-12-31)
    Many native populations in South America have been severely impacted by two relatively recent historical events, the Inca and the Spanish conquest. However decisive these disruptive events may have been, the populations ...
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    Developmental Validation of a MPS Workflow with a PCR-Based Short Amplicon Whole Mitochondrial Genome Panel 

    Cihlar, Jennifer Churchill; Amory, Christina; Lagace, Robert; Roth, Chantal; Parson, Walther; Budowle, Bruce (MDPI, 2020-11-13)
    For the adoption of massively parallel sequencing (MPS) systems by forensic laboratories, validation studies on specific workflows are needed to support the feasibility of implementation and the reliability of the data ...
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    Evaluating the Impact of Dropout and Genotyping Error on SNP-Based Kinship Analysis With Forensic Samples 

    Turner, Stephen D.; Nagraj, V. P.; Scholz, Matthew; Jessa, Shakeel; Acevedo, Carlos; Ge, Jianye; Woerner, August E.; Budowle, Bruce (Frontiers Media S.A., 2022-06-30)
    Technological advances in sequencing and single nucleotide polymorphism (SNP) genotyping microarray technology have facilitated advances in forensic analysis beyond short tandem repeat (STR) profiling, enabling the ...
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    skater: an R package for SNP-based kinship analysis, testing, and evaluation 

    Turner, Stephen D.; Nagraj, V. P.; Scholz, Matthew; Jessa, Shakeel; Acevedo, Carlos; Ge, Jianye; Woerner, August E.; Budowle, Bruce (F1000 Research Ltd., 2022-01-07)
    Motivation: SNP-based kinship analysis with genome-wide relationship estimation and IBD segment analysis methods produces results that often require further downstream process- ing and manipulation. A dedicated software ...
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    Evaluation of forensic DNA mixture evidence: protocol for evaluation, interpretation, and statistical calculations using the combined probability of inclusion 

    Bieber, Frederick R.; Buckleton, John S.; Budowle, Bruce; Butler, John M.; Coble, Michael D. (BioMed Central Ltd., 2016-08-31)
    BACKGROUND: The evaluation and interpretation of forensic DNA mixture evidence faces greater interpretational challenges due to increasingly complex mixture evidence. Such challenges include: casework involving low quantity ...
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    How many familial relationship testing results could be wrong? 

    Ge, Jianye; Budowle, Bruce (PLOS, 2020-08-13)
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    A Continuous Statistical Phasing Framework for the Analysis of Forensic Mitochondrial DNA Mixtures 

    Smart, Utpal; Cihlar, Jennifer Churchill; Mandape, Sammed N.; Muenzler, Melissa; King, Jonathan L.; Budowle, Bruce; Woerner, August E. (MDPI, 2021-01-20)
    Despite the benefits of quantitative data generated by massively parallel sequencing, resolving mitotypes from mixtures occurring in certain ratios remains challenging. In this study, a bioinformatic mixture deconvolution ...
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    Precision DNA Mixture Interpretation with Single-Cell Profiling 

    Ge, Jianye; King, Jonathan L.; Smuts, Amy; Budowle, Bruce (MDPI, 2021-10-20)
    Wet-lab based studies have exploited emerging single-cell technologies to address the challenges of interpreting forensic mixture evidence. However, little effort has been dedicated to developing a systematic approach to ...
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    Results of a collaborative study on DNA identification of aged bone samples 

    Vanek, Daniel; Budowle, Bruce; Dubska-Votrubova, Jitka; Ambers, Angie; Frolik, Jan; Pospisek, Martin; Al Afeefi, Ahmed Anwar; Al Hosani, Khalid Ismaeil; Allen, Marie; Al Naimi, Khudooma Saeed; Al Salafi, Dina; Al Tayyari, Wafa Ali Rashid; Argueta, Wendy C.; Bottinelli, Michel; Bus, Magdalena M.; Cemper-Kiesslich, Jan; Cepil, Olivier; De Cock, Greet; Desmyter, Stijn; El Amri, Hamid; El Ossmani, Hicham; Galdies, Ruth; Grun, Sebastian; Guidet, Francois; Hoefges, Anna; Iancu, Cristian Bogdan; Lotz, Petra; Maresca, Alessandro; Nagy, Marion; Novotny, Jindrich; Rachid, Hajar; Rothe, Jessica; Stenersen, Marguerethe; Stephenson, Mishel; Stevanovitch, Alain; Strien, Juliane; Sumita, Denilce R.; Vella, Joanna; Zander, Judith (Medicinska naklada, 2017-06-14)
    AIM: A collaborative exercise with several institutes was organized by the Forensic DNA Service (FDNAS) and the Institute of the Legal Medicine, 2nd Faculty of Medicine, Charles University in Prague, Czech Republic, with ...

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    Budowle, Bruce (9)
    Ge, Jianye (4)King, Jonathan L. (3)Woerner, August E. (3)Acevedo, Carlos (2)Bus, Magdalena M. (2)Cihlar, Jennifer Churchill (2)Jessa, Shakeel (2)Nagraj, V. P. (2)Scholz, Matthew (2)... View MoreSubjectHumans (8)Forensic Genetics / methods (5)DNA / analysis (3)Algorithms (2)bioinformatics (2)Computational Biology (2)genealogy (2)Genome, Mitochondrial (2)High-Throughput Nucleotide Sequencing / methods (2)Ion Torrent (2)... View MoreDate Issued2020 (3)2021 (2)2022 (2)2016 (1)2017 (1)Has File(s)
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