Automodification Reaction of PARP-1 Reversibly Regulates the DNA-Binding of NF-kB
dc.contributor.advisor | Alvarez, Rafael | |
dc.contributor.committeeMember | Mathew, Porunelloor A. | |
dc.contributor.committeeMember | Goldfarb, Ronald H. | |
dc.creator | Chang, Woo-Jin | |
dc.date.accessioned | 2019-08-22T19:28:51Z | |
dc.date.available | 2019-08-22T19:28:51Z | |
dc.date.issued | 2001-11-01 | |
dc.date.submitted | 2013-06-27T15:00:08-07:00 | |
dc.description.abstract | Chang, Woo-Jin, Automodification Reaction of PARP-1 Reversibly Regulates the DNA-Binding of NF-kB, Doctor of Philosophy (Microbiology and Immunology), November, 2001, 92 Pages, 20 figures, 3 schemes, and bibliography. Poly(ADP-ribose) polymerase (PARP-1, E.C. 2.4.2.30) is a constitutively expressed nuclear enzyme. It comprises about 1% of the total nuclear protein and in phylogenetically well conserved in most eukaryotes, with a notable exception in yeast. PARP-1 post transitionally modifies DNA-binding proteins by transferring the ADP-ribose moiety from BNAD+. Although the exact biological function of poly(ADP-ribosyl)ation has not been clearly elucidated, the process is thought to be involved in DNA repair, replication, and gene expression. Previous studies have indicated that PARP-1 participates in eukaryotic gene expression including the genes under the control of nuclear factor-kB (NF-kB). It has been demonstrated that PARP-1 deficient mice are more resistant to lipopolysaccharide-induced endotoxic shock than isogenic wild-type mice due to the inactivation of NP-kB in the mutants. In order to further analyze the interactions between PARP-1, NF-kB, and its consensus DNA in a cell-free system, we co-incubated recombinant PARP-1 protein and the p50-subunit of NF-kB (NF-kB-p50) in the absence of DNA strand-breaks. Electrophoretic mobility shift assays (EMSA) showed that sequence-specific DNA-binding of NF-kB-p50 was dependent on autopoly(ADP-ribosyl)ation of PARP-1. The NF-kB-p50 DNA-binding was inhibitied when PARP-1 was not auto-poly(ADP-ribosyl)ated either in the absence of BNAD+ or in the presence of 3-aminobenzamide, an enzymatic inhibitor of PARP-1. Coimmunoprecipation and immunoblot analysis demonstrated that NF-kB-p50 formed a heterodimer with PARP-1 when PARP-1 was not auto-poly(ADP-ribosyl)ated. In addition, poly(ADP-ribosyl)ation assays showed that NF-kB-p50 protein was not susceptible to poly(ADP-ribosyl)ation under normal incubation conditions. Those in vitro observations described above were confirmed by experiments utilizing HeLa nuclear extracts. EMSA showed that NF-kB DNA-binding was inhibited in 3-AB-pre-treated HeLa cells. To our knowledge, this is the first report demonstrating that auto-poly(ADP-ribosyl)ation reaction by PARP-1 reversibly regulates the function of a transcription factor by inhibiting the formation of heterodimer between PARP-1 and a transcription factor. | |
dc.format.mimetype | application/pdf | |
dc.identifier.uri | https://hdl.handle.net/20.500.12503/25814 | |
dc.language.iso | en | |
dc.provenance.legacyDownloads | 0 | |
dc.subject | Biomechanics and Biotransport | |
dc.subject | Biomedical Engineering and Bioengineering | |
dc.subject | Cell and Developmental Biology | |
dc.subject | Cell Biology | |
dc.subject | Cells | |
dc.subject | Cellular and Molecular Physiology | |
dc.subject | Genetics and Genomics | |
dc.subject | Life Sciences | |
dc.subject | Medical Cell Biology | |
dc.subject | Medical Genetics | |
dc.subject | Medicine and Health | |
dc.subject | Medicine and Health Sciences | |
dc.subject | DNA | |
dc.subject | Nuclear factor kB | |
dc.subject | auto-poly(ADP-ribosyl)ation | |
dc.subject | PARP-1 | |
dc.subject | transcription factor | |
dc.title | Automodification Reaction of PARP-1 Reversibly Regulates the DNA-Binding of NF-kB | |
dc.type | Dissertation | |
dc.type.material | text | |
thesis.degree.department | Graduate School of Biomedical Sciences | |
thesis.degree.discipline | Microbiology and Immunology | |
thesis.degree.grantor | University of North Texas Health Science Center at Fort Worth | |
thesis.degree.name | Doctor of Philosophy |
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